Unlikely. The membrane on fish eggs is pretty solid stuff. It protects the fry from the outside environment. Hatcheries will use a dilute bleach solution to clean wild eggs--they swirl the eggs through it very quickly, then seive them off into clean water. Kills any nasties that might be in the water and avoids bringing that into the isolation station.
Heck, we add formalin drips to the egg incubators for fungus, and that doesn't have any effect on the hatch rates compared to incubators that aren't prone to fungus infections.