You need to use some type of filter that will not agitate the water's surface. Hang On Back ("HOB") filters will not work. I tried it on a 20 gallon long, after already having learned my lesson on a 75 gallon tank, and it just does not work. You either need to go with a canister filter or a filter that works inside the tank. I believe Fluval makes a submersed filter that doesn't cause surface agitation. It might be called the Fluval 3 or Fluval 4, if memory serves me correctly. You can also find a powerhead that uses a filter attachment on it. Me, I am using an Aquaclear 70 with a filter attachment on it. Problem with my situation is that the powerhead filter media does not allow for chemical filtration or the addition of any media whatsoever.So, then does that way get me out of having to use a canister filter? I am not intentionally trying to get out of it, I just really can't afford to by one. But I really need to do some thing soon because my plants are turning yellow.
To answer your question directly, if you go with a reactor you will not have to attach the CO2 line to a canister filter input. The reason people use canister filters to mix the CO2 is so they do not have to spend the money on a reactor. Me, I either buy a cheap $10 reactor, or on my 120 gallon system I buy the $100 reactor that mixes the CO2 up pretty quickly.