I'm reading up a bit on www.dwarfpuffer.com and it seems that a rule of thumb for these type of fish is 50% weekly, which I could totally live with. The every other day thing just does not seem like something I would realistically be able to honestly do for years on end as much as it might sound simple initially. So to be fair, if that was the case then this idea would be a no-go.
Does anyone know if the amount of "real" plants that you could fit in a 3 G would have a worthwhile impact on the bio-load? Or would it just make more sense to go artificial (to ensure dense foliage these lil guys need) and count on the WWC's to keep things clean?
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I would do 30%ish 2x/week rather than one large one.
Real plants are always the way to go! The lighting on the Eclipse 3 leaves a lot to be desired but you can pack it full of low light plants. Plants are great for keeping your nitrate levels low and your tank free of algae. Plastic plants are algae magnets. These fish are hunters and giving them plenty of nooks and crannies to investigate will keep them entertained all day.
I would also go with live plants. They will add to the water quality/stability as well as adding aesthetically to the tank.