Roma - the brown algae you are referring to is probably diatoms. If I remember correctly your tank has not been set up long and new tanks are subject to this soft, brown algae. It goes away as the tank matures. Otocinclas cats are also good at removing it from glass and plant leaves along with you physically cleaning it off.
Here is an article that can help you identify what the 'black' algae is that you're currently experiencing:
http://www.plantgeek.net/article_viewer.php?id=9
Check it out and see if you see yours there. When you ask for help it would help us if you could include as much information as possible.
Information like types of plants, plant mass (how many plants), water parameters (pH, gH etc. Nitrates "through the roof" is of no help at all. Have you measured them and if so how many ppm? Have you measured anything else, such as phosphates?
If you have test kits, test for N and P and pH and anything else you can and post the results of the testing so we can help you. Test both tank and tap so we can see what your getting when you do your water changes.
Algae is caused mostly by an imbalance of one of the major areas......fish,light,nutrients,plants. Once you find the balance of these elements for your tank it will start to clear for you. I'm not there to see it, so you need to fill us in on the tank.
BTW, if you can take a picture it would be of great help.
Len