Quoted directly from the abstract of the article linked above. Without being able to read the whole thing, this alone says a TON. Interesting, too.
"Oxidation of nitrite to nitrate in aquaria is typically attributed to bacteria belonging to the genus
Nitrobacter which are members of the
subdivision of the class
Proteobacteria. In order to identify bacteria responsible for nitrite oxidation in aquaria, clone libraries of rRNA genes were developed from biofilms of several freshwater aquaria. Analysis of the rDNA libraries, along with results from denaturing gradient gel electrophoresis (DGGE) on frequently sampled biofilms, indicated the presence of putative nitrite-oxidizing bacteria closely related to other members of the genus
Nitrospira. Nucleic acid hybridization experiments with rRNA from biofilms of freshwater aquaria demonstrated that
Nitrospira-like rRNA comprised nearly 5% of the rRNA extracted from the biofilms during the establishment of nitrification. Nitrite-oxidizing bacteria belonging to the
subdivision of the class
Proteobacteria (e.g.,
Nitrobacter spp.) were not detected in these samples. Aquaria which received a commercial preparation containing
Nitrobacter species did not show evidence of
Nitrobacter growth and development but did develop substantial populations of
Nitrospira-like species. Time series analysis of rDNA phylotypes on aquaria biofilms by DGGE, combined with nitrite and nitrate analysis, showed a correspondence between the appearance of
Nitrospira-like bacterial ribosomal DNA and the initiation of nitrite oxidation. In total, the data suggest that
Nitrobacter winogradskyi and close relatives were not the dominant nitrite-oxidizing bacteria in freshwater aquaria. Instead, nitrite oxidation in freshwater aquaria appeared to be mediated by bacteria closely related to
Nitrospira moscoviensis and
Nitrospira marina."