Ok so I have emailed them and catpicklesdog is right, they got back to me within about a day, which is awesome.
Here is what he said:
He believed that the patches were caused by stress, which could come from a number of things, a borderline Nitrate level,the damsel, possibly my brittle sea star: it the species was Ophiarachna in particular, this animal could be over-stressing the Paracanthurus(my tang) by night... I am having a hard time figuring out what specific species my brittle sea star is..
... however he didn't think it was caused by his diet not having enough greens. I have done water changes to bring the Nitrate down (it has always been at this level, since I set up the tank), but it doesn't seem to do much.. which I think is because the tank is not 'well developed' quite yet, and I have a deep sand bed. I plan on doing an oxygen (because I recently removed my protein skimmer because it wasn't doing crap) and a Nitrate test later and possibly a water change.
He provided me with a good link to more info on the tang:
http://wetwebmedia.com/paracant.htmHe also mentioned that the tang needed more room to swim than a 55G, which I know is true and plan to upgrade later. However I think the main problem might be my damsel, if that is the case then I can move the damsel out.
An update on the condition of the tang: the spots have definitely cleared up a lot...almost gone, but who knows if they will come back again.