Coy, for adding substrate, not much to worry about, but follow these steps to avoid clouding the water again:
1. Wash the substrate thoroughly (as per normal)
2. Put it in a bucket and top off with clean water or tank-water and ensure that there's a bit of water over the top of the substrate. (stirr it a bit to release trapped air-bubbles)
3. Use a cup or plastic container to scoop the substrate out of the bucket.
- Leave some water from the bucket in your container or cup, (just above the substrate again.) The reason being that any small particles would normally get into your tank-water if there's air between the substrate-particles. The air would whirl up, taking those dust/small particles with them. Less chance with water already capturing them.
4. Put the container in the tank (under an angle so that water from the tank gets in slowly, then bring the container to the bottom and topple it over as close to the bottom as possible.
If you're in a hurry, simply use the bucket itself with some clean tap-water on top of the substrate. Just make sure that most air has been released before adding to the tank.
No other problems, after adding it, just slowly disperse it through the tank.